@article {4573, title = {Predicting post-surgical functional status in high-grade glioma with resting state fMRI and machine learning.}, journal = {J Neurooncol}, volume = {169}, year = {2024}, month = {2024 Aug}, pages = {175-185}, abstract = {

PURPOSE: High-grade glioma (HGG) is the most common and deadly malignant glioma of the central nervous system. The current standard of care includes surgical resection of the tumor, which can lead to functional and cognitive deficits. The aim of this study is to develop models capable of predicting functional outcomes in HGG patients before surgery, facilitating improved disease management and informed patient care.

METHODS: Adult HGG patients (N = 102) from the neurosurgery brain tumor service at Washington University Medical Center were retrospectively recruited. All patients completed structural neuroimaging and resting state functional MRI prior to surgery. Demographics, measures of resting state network connectivity (FC), tumor location, and tumor volume were used to train a random forest classifier to predict functional outcomes based on Karnofsky Performance Status (KPS < 70, KPS >= 70).

RESULTS: The models achieved a nested cross-validation accuracy of 94.1\% and an AUC of 0.97 in classifying KPS. The strongest predictors identified by the model included FC between somatomotor, visual, auditory, and reward networks. Based on location, the relation of the tumor to dorsal attention, cingulo-opercular, and basal ganglia networks were strong predictors of KPS. Age was also a strong predictor. However, tumor volume was only a moderate predictor.

CONCLUSION: The current work demonstrates the ability of machine learning to classify postoperative functional outcomes in HGG patients prior to surgery accurately. Our results suggest that both FC and the tumor{\textquoteright}s location in relation to specific networks can serve as reliable predictors of functional outcomes, leading to personalized therapeutic approaches tailored to individual patients.

}, keywords = {Adult, Aged, Brain, Brain Neoplasms, Female, Glioma, Humans, machine learning, Magnetic Resonance Imaging, Male, Middle Aged, Neoplasm Grading, Prognosis, Rest, Retrospective Studies}, issn = {1573-7373}, doi = {10.1007/s11060-024-04715-1}, author = {Luckett, Patrick H and Olufawo, Michael O and Park, Ki Yun and Lamichhane, Bidhan and Dierker, Donna and Verastegui, Gabriel Trevino and Lee, John J and Yang, Peter and Kim, Albert and Butt, Omar H and Chheda, Milan G and Snyder, Abraham Z and Shimony, Joshua S and Leuthardt, Eric C} } @article {2207, title = {Prior knowledge improves decoding of finger flexion from electrocorticographic signals.}, journal = {Front Neurosci}, volume = {5}, year = {2011}, month = {11/2011}, pages = {127}, abstract = {

Brain-computer interfaces (BCIs) use brain signals to convey a user{\textquoteright}s intent. Some BCI approaches begin by decoding kinematic parameters of movements from brain signals, and then proceed to using these signals, in absence of movements, to allow a user to control an output. Recent results have shown that electrocorticographic (ECoG) recordings from the surface of the brain in humans can give information about kinematic parameters (e.g., hand velocity or finger flexion). The decoding approaches in these studies usually employed classical classification/regression algorithms that derive a linear mapping between brain signals and outputs. However, they typically only incorporate little prior information about the target movement parameter. In this paper, we incorporate prior knowledge using a Bayesian decoding method, and use it to decode finger flexion from ECoG signals. Specifically, we exploit the constraints that govern finger flexion and incorporate these constraints in the construction, structure, and the probabilistic functions of the prior model of a switched non-parametric dynamic system (SNDS). Given a measurement model resulting from a traditional linear regression method, we decoded finger flexion using posterior estimation that combined the prior and measurement models. Our results show that the application of the Bayesian decoding model, which incorporates prior knowledge, improves decoding performance compared to the application of a linear regression model, which does not incorporate prior knowledge. Thus, the results presented in this paper may ultimately lead to neurally controlled hand prostheses with full fine-grained finger articulation.

}, keywords = {brain-computer interface, decoding algorithm, electrocorticographic, finger flexion, machine learning, prior knowledge}, issn = {1662-453X}, doi = {10.3389/fnins.2011.00127}, url = {http://www.ncbi.nlm.nih.gov/pubmed/22144944}, author = {Zuoguan Wang and Ji, Q and Miller, John W and Gerwin Schalk} }